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CaliBrain

Installation
Documentation
API Reference
Development

GitHub

Installation
Documentation
API Reference
Development

GitHub

Section Navigation

calibrain.LeadfieldBuilder
calibrain.SourceSimulator
calibrain.SensorSimulator
calibrain.SourceEstimator
calibrain.UncertaintyEstimator
calibrain.UncertaintyCalibrator
calibrain.MetricEvaluator
calibrain.Visualizer
calibrain.DataGenerator
calibrain.gamma_map_sflex
calibrain.gamma_lambda_map_sflex
calibrain.BMN
calibrain.BMN_joint

Top-level public API

calibrain.LeadfieldBuilder
calibrain.SourceSimulator
calibrain.SensorSimulator
calibrain.SourceEstimator
calibrain.UncertaintyEstimator
calibrain.UncertaintyCalibrator
calibrain.MetricEvaluator
calibrain.Visualizer
calibrain.DataGenerator
calibrain.gamma_map_sflex
calibrain.gamma_lambda_map_sflex
calibrain.BMN
calibrain.BMN_joint

calibrain.workflows.data_generation.run_data_generation
calibrain.workflows.aggregation.aggregate_posteriors
calibrain.workflows.calibration.run_calibration
calibrain.workflows.calibration.build_uncertainty_components
calibrain.workflows.plot_paper_calibration_figures.main

Workflow entrypoints

calibrain.workflows.data_generation.run_data_generation
calibrain.workflows.aggregation.aggregate_posteriors
calibrain.workflows.calibration.run_calibration
calibrain.workflows.calibration.build_uncertainty_components
calibrain.workflows.plot_paper_calibration_figures.main

calibrain.run_manifest.ManifestRow
calibrain.run_manifest.load_manifest_csv
calibrain.run_manifest.summaries_from_manifest
calibrain.calibration_dataset.PosteriorSummary
calibrain.calibration_dataset.load_posterior_summary
calibrain.calibration_dataset.filter_summaries_by_metadata
calibrain.calibration_dataset.concatenate_summaries
calibrain.calibration_storage.save_calibration_record
calibrain.calibration_storage.load_calibration_record
calibrain.calibration_storage.iter_calibration_records
calibrain.calibration_storage.stack_empirical_curves

Data model helpers

calibrain.run_manifest.ManifestRow
calibrain.run_manifest.load_manifest_csv
calibrain.run_manifest.summaries_from_manifest
calibrain.calibration_dataset.PosteriorSummary
calibrain.calibration_dataset.load_posterior_summary
calibrain.calibration_dataset.filter_summaries_by_metadata
calibrain.calibration_dataset.concatenate_summaries
calibrain.calibration_storage.save_calibration_record
calibrain.calibration_storage.load_calibration_record
calibrain.calibration_storage.iter_calibration_records
calibrain.calibration_storage.stack_empirical_curves

calibrain.metric_evaluation.get_subset_source_rr
calibrain.uncertainty_estimation.lift_reduced_sources_to_3d
calibrain.utils.get_data_path
calibrain.utils.load_config
calibrain.utils.load_python_config

Metric and utility helpers

calibrain.metric_evaluation.get_subset_source_rr
calibrain.uncertainty_estimation.lift_reduced_sources_to_3d
calibrain.utils.get_data_path
calibrain.utils.load_config
calibrain.utils.load_python_config

API Reference
calibrain.workflows.calibration.run_calibration

calibrain.workflows.calibration.run_calibration#

calibrain.workflows.calibration.run_calibration(config)[source]#

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run_calibration()

© Copyright 2025, Mohammad Orabe, Ismail Huseynov, Srikantan Nagarajan, Stefan Haufe.

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